Months later, Brennan is still on the run from the FBI, after being framed for murder by Christopher Pelant. The remaining team searches for the real killer.

A burned body is found. The victim is a divorce lawyer who had a lot of disgruntled clients. With Brennan back home, she and Booth have to adjust to living together. They have various disagreements about the new routines at home.

A man dies in a car explosion. After identifying the man, Booth and Brennan find he is still alive. Turns out, the two guys are twins who did not know of the other. Both men are browbeaten by their wives, one of which wanted her h...

An employee is killed in an animal park, and the team determines it is linked to illegal animal trafficking. Dr Sweets and Daisy discuss the current status of their relationship and make a decision.

The team identify a woman's eviscerated body as a co-owner of a natural applesauce store. There is a symmetry to her incisions. Sweets has been living in his office since the breakup with Daisy so Booth invites him to stay with hi...

Brennan, intrigued by Phil Jackson's management style, pulls all her interns together as a team for a project worthy of the basketball coach's philosophy. She charges them with identifying remains that have been determined unident...

The Jeffersonian team investigates the death of a crime scene cleanup expert whose remains are found mysteriously sealed in an impenetrable pod that washed up on the beach. Meanwhile, Angela and Hodgins learn that Cam is involved ...

An artist gluing his artwork on a billboard slips and falls with his glue on top of a corpse. The team has to separate the artist from the bones. Angela realizes the artist is a famous street painter. Bones takes up comedy to find...

The team talk to the deceased teenaged victim as if he is alive. A psychic visits and says the victim called her to help with the case. The boy's spirit affects everyone as they look for his killer.

Brennan and Booth enter a dance competition to find a killer of a contestant. After the killer is caught, Brennan still wants to enter the competition for the judges.

An archaeologist is found murdered. His lab holds ancient remains of Neanderthals and Homosapiens; these are given to Clark to research. Brennan is jealous that she has to work the current case and not the ancient one.

After Hodgins and Angela were drugged and woke up to a bloody corpse hanging in the canopy of their bed and flower petals around their son Michael's crib, they are forced to believe that Pelant is back for revenge against Hodgins....

The Jeffersonian team investigates the remains of two bodies that were found at the same burial plot: one of a female cancer patient; the other, the doula who was guiding her through her grieving process with the illness. Meanwhil...

The dismembered body of a roller derby skater means Angela goes undercover at the rink to find more clues to the woman's murder. Elsewhere, Cam worries over the sheer number of doctor appointments Booth is going to, and presses hi...

When Brennan is shot while working late at the Jeffersonian lab, she is rushed to the hospital in critical condition. While at the hospital, she struggles with visions of her mother that defy her usual logic. Meanwhile all evidenc...

The Jeffersonian team investigates the remains of a 15-year-old boy. Although his mother and few close friends saw him as intelligent with poor social skills, the team discovers that this seemingly innocent boy was actually involv...

When extremely educated new intern Dr. Oliver Wells starts working at the Jeffersonian, his quick-learning, enthusiastic personality challenges Brennan as he gets under her skin with his eccentric but undeniable observations, caus...

The Jeffersonian team investigates the death of Symchay Conteh, a young man whose remains were found in a barrel at a hazardous waste disposal facility. They discover that the victim was an immigrant from Sierra Leone working nume...

When the Jeffersonian team investigates the death of a former Marine sergeant whose remains were found burned to a crisp, they discover that she was discharged after a fist fight with another Marine. When Booth and Sweets go to qu...

An undercover police officer, who was investigating a string of ATM robberies, turns up dead in a van with a bag of diamonds found inside his mutilated body. So the Jeffersonian team must figure out whether or not the ATM robbers ...

The Jeffersonian team investigates the murder of a TV producer. Meanwhile, Brennan has trouble accepting the fact that Christine might be an "average" child, when her daughter gets accused of biting another classmate. Then, Hodgin...

The Jeffersonian team investigates the murder of Jack Spindler, a successful employee at a brokerage firm by day, but a stripper by night. When the team learns how Spindler's moonlighting affected his personal life, they start to ...

The Jeffersonian team rushes to prevent a viral outbreak while investigating the murder of journalist Mia Garrett after her infected body is found at a biohazard facility. When the mutated virus that killed Mia infects Jeffersonia...

When evil tech genius Christopher Pelant returns to toy with the Jeffersonian team in their newest investigation, they discover that the string of murders that have been occurring are tied to FBI agents close to Booth. Meanwhile, ...